ncRNA ID | novel_gra_miR620 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr10:25947552-25947742 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGGCAAUUAAUGGCUCAGUGACU - 24 |
Stem-loop(if miRNA) |
--                 A       U       CG    GU       A  UA                        AAAUA    GACC    G   UCACUGAGUCGUUAAUU CUGUUAA GGUGUAA  GUAA  UAACGUG CA  UUAAAUCGUCAUUUCAAACGAAAA     UAGG    AAUU U   ||||||||||||||||| ||||||| |||||||  ||||  ||||||| ||  ||||||||||||||||||||||||     ||||    |||| A   AGUGACUCGGUAAUUAA GGCAAUU CCACAUU  CAUU  AUUGCAC GU  AAUUUAGUAGUAAAGUUUGUUUUU     AUUC    UUAA U UC                 C       U       AU    UG       C  GC                        --AAA    --AA    A |
Stem-loop sequence | UCACUGAGUCGUUAAUUACUGUUAAUGGUGUAACGGUAAGUUAACGUGACAUAUUAAAUCGUCAUUUCAAACGAAAAAAAUAUAGGGACCAAUUGUAUAAAUUAACUUAAAAUUUUUGUUUGAAAUGAUGAUUUAACGUGCCACGUUAGUUUACUAUUACACCUUUAACGGCAAUUAAUGGCUCAGUGACU |