ncRNA ID | novel_gra_miR612 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr12:3456085-3456139 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 32 - GUUUGAUUUGGUGUGAUUAGACGU - 55 |
Stem-loop(if miRNA) |
--   A     A            AAAG   GUC GAUCA CACUAAGUCAAA    A   ||| ||||| ||||||||||||   CAG UUAGU GUGGUUUAGUUU    C UG   A     -            GUUG |
Stem-loop sequence | GUCAGAUCAACACUAAGUCAAAAAAGACGUUGUUUGAUUUGGUGUGAUUAGACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012604298.1 |
|
2.0 | PREDICTED: Gossypium raimondii NADPH:quinone oxidoreductase-like (LOC105780150), transcript variant X5, mRNA | NADPH:quinone oxidoreductase-like(LOC105780150) | coding protein | psRNATarget |