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BaseInfo

ncRNA ID novel_gra_miR603
Species Gossypium raimondii
Class miRNA
Genome position Chr12:17617721-17617776 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 22
Mature sequence(if miRNA) 35 - UAGCAUCAGCAUUUUGUGAGCA - 56
Stem-loop(if miRNA) --    G       AG   -    -  AU
  CUCA CAGAGUG  GAU CUGA UC  G
  |||| |||||||  ||| |||| ||  G
  GAGU GUUUUAC  CUA GAUU AG  A
AC    -       GA   C    U  GA
Stem-loop sequence CUCAGCAGAGUGAGGAUCUGAUCAUGGAAGGAUUUAGCAUCAGCAUUUUGUGAGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_012581496.1
ncRNA:22   ACGAGUGUUUUACGACUACGAU   1
  **=|||*|=||||||||||||=
targets:1603   AUUUCAAAGAAUGCUGAUGCUG   1624

3.0 PREDICTED: Gossypium raimondii pentatricopeptide repeat-containing protein At5g66631 (LOC105763307), mRNA pentatricopeptide repeat-containing protein At5g66631(LOC105763307) coding protein psRNATarget