ncRNA ID | novel_gra_miR603 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr12:17617721-17617776 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 22 |
Mature sequence(if miRNA) | 35 - UAGCAUCAGCAUUUUGUGAGCA - 56 |
Stem-loop(if miRNA) |
--    G       AG   -    -  AU   CUCA CAGAGUG  GAU CUGA UC  G   |||| |||||||  ||| |||| ||  G   GAGU GUUUUAC  CUA GAUU AG  A AC    -       GA   C    U  GA |
Stem-loop sequence | CUCAGCAGAGUGAGGAUCUGAUCAUGGAAGGAUUUAGCAUCAGCAUUUUGUGAGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012581496.1 |
|
3.0 | PREDICTED: Gossypium raimondii pentatricopeptide repeat-containing protein At5g66631 (LOC105763307), mRNA | pentatricopeptide repeat-containing protein At5g66631(LOC105763307) | coding protein | psRNATarget |