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BaseInfo

ncRNA ID novel_gra_miR601
Species Gossypium raimondii
Class miRNA
Genome position Chr1:221067-221265 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - AUGAAACUGUGAUUUCACGUCAUC - 24
Stem-loop(if miRNA) --      C           G     C        A C     G  A       A    A    U  C  U       C   U     CUC     AAAA
  AUGAAA UGUGAUUUCAC UCAUC UUAUCUCU U UAAUA GA AAUGACA AUCA AUUU UC UU UGAUUUU AGC UUUUU   UUGGA    A
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  UACUUU GCACUAAAGUG AGUAG AAUAGGGA A AUUAU CU UUACUGU UAGU UAAA AG AG ACUAAAA UCG AAAAA   AACCU    U
AA      A           G     A        A A     A  C       G    C    U  A  U       A   U     -UC     AAAU
Stem-loop sequence AUGAAACUGUGAUUUCACGUCAUCCUUAUCUCUAUCUAAUAGGAAAAUGACAAAUCAAAUUUUUCCUUUUGAUUUUCAGCUUUUUUCUCUUGGAAAAAAUUAAAUCCAACUAAAAAUGCUAAAAAUCAUGAAGAUAAAUCUGAUGUGUCAUUCUCAUAUUAAAAAGGGAUAAAGAUGAGGUGAAAUCACGAUUUCAUAA