ncRNA ID | novel_gra_miR596 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:11751000-11751080 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGGCGCCUAUCUCAGAGGCGCCA - 24 |
Stem-loop(if miRNA) |
--        UA      --A                   AU   UUGGCGCC  UCUCAG   GGCGCCAAUGGUGGUGCCU  C   ||||||||  ||||||   |||||||||||||||||||  U   AACCGCGG  AGAGUC   CCGUGGUUAUUAUCGCGGA  G GU        --      AUA                   GG |
Stem-loop sequence | UUGGCGCCUAUCUCAGAGGCGCCAAUGGUGGUGCCUAUCUGGGAGGCGCUAUUAUUGGUGCCAUACUGAGAGGCGCCAAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012632413.1 |
|
1.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105801078 (LOC105801078), mRNA | uncharacterized LOC105801078(LOC105801078) | coding protein | psRNATarget | |||||||||
XM_012632413.1 |
|
2.5 | PREDICTED: Gossypium raimondii uncharacterized LOC105801078 (LOC105801078), mRNA | uncharacterized LOC105801078(LOC105801078) | coding protein | psRNATarget |