ncRNA ID | novel_gra_miR588 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:3101097-3101241 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 122 - GCAUUGUCACAUGGGUGACUCGUC - 145 |
Stem-loop(if miRNA) |
-- C     C           U       U        U        UU  AAAAU         -     AAAA   G AUUGU ACAUGGGUGAC CGUCAGC UUUAAUUA UUUUUUAA  UA     UUAGAAAAU UAUUU    A   | ||||| ||||||||||| ||||||| |||||||| ||||||||  ||     ||||||||| |||||    U   C UAACG UGUAUUUACUG GCAGUUG AAAUUAAU AAAAAAUU  AU     AAUUUUUUA AUAAA    U UA C     U           U       U        U        UU  -----         U     AAUA |
Stem-loop sequence | GCAUUGUCACAUGGGUGACUCGUCAGCUUUUAAUUAUUUUUUUAAUUUAAAAAUUUAGAAAAUUAUUUAAAAAUUAUAAAAAUAUAUUUUUUAAUAUUUUAAAAAAUUAAUUAAAUGUUGACGUGUCAUUUAUGUUGCAAUCCAU |