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BaseInfo

ncRNA ID novel_gra_miR588
Species Gossypium raimondii
Class miRNA
Genome position Chr1:3101097-3101241 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 122 - GCAUUGUCACAUGGGUGACUCGUC - 145
Stem-loop(if miRNA) -- C     C           U       U        U        UU  AAAAU         -     AAAA
  G AUUGU ACAUGGGUGAC CGUCAGC UUUAAUUA UUUUUUAA  UA     UUAGAAAAU UAUUU    A
  | ||||| ||||||||||| ||||||| |||||||| ||||||||  ||     ||||||||| |||||    U
  C UAACG UGUAUUUACUG GCAGUUG AAAUUAAU AAAAAAUU  AU     AAUUUUUUA AUAAA    U
UA C     U           U       U        U        UU  -----         U     AAUA
Stem-loop sequence GCAUUGUCACAUGGGUGACUCGUCAGCUUUUAAUUAUUUUUUUAAUUUAAAAAUUUAGAAAAUUAUUUAAAAAUUAUAAAAAUAUAUUUUUUAAUAUUUUAAAAAAUUAAUUAAAUGUUGACGUGUCAUUUAUGUUGCAAUCCAU