ncRNA ID | novel_gra_miR582 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:10964256-10964390 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUCCGCUUUUCGGAUGGUA - 21 |
Stem-loop(if miRNA) |
U    C      -      -   AA     -U  A   UAU    --UG       -AACCCAU    GA  UUUC GCUUUU CGGAUG GUA  UAUUU  UC GAA   GAAG    UGAAUCA        GUUU  A  |||| |||||| |||||| |||  |||||  || |||   ||||    |||||||        ||||  AGAG UGAGAA GUCUAU CAU  AUAAA  AG CUU   CUUC    ACUUAGU        UAAA  U A    U      A      A   AG     CU  G   -CU    UUGA       CAUAGAAU    GU |
Stem-loop sequence | UUUUCCGCUUUUCGGAUGGUAAAUAUUUUUCAGAAUAUGAAGUGUGAAUCAAACCCAUGUUUGAAUUGAAAUUAAGAUACUGAUUCAAGUUCUUCUCUUCGGAUCAAAUAGAUACAUAUCUGAAAGAGUUGAGAA |