Search result

BaseInfo

ncRNA ID novel_gra_miR582
Species Gossypium raimondii
Class miRNA
Genome position Chr1:10964256-10964390 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 21
Mature sequence(if miRNA) 1 - UUUUCCGCUUUUCGGAUGGUA - 21
Stem-loop(if miRNA) U    C      -      -   AA     -U  A   UAU    --UG       -AACCCAU    GA
 UUUC GCUUUU CGGAUG GUA  UAUUU  UC GAA   GAAG    UGAAUCA        GUUU  A
 |||| |||||| |||||| |||  |||||  || |||   ||||    |||||||        ||||
 AGAG UGAGAA GUCUAU CAU  AUAAA  AG CUU   CUUC    ACUUAGU        UAAA  U
A    U      A      A   AG     CU  G   -CU    UUGA       CAUAGAAU    GU
Stem-loop sequence UUUUCCGCUUUUCGGAUGGUAAAUAUUUUUCAGAAUAUGAAGUGUGAAUCAAACCCAUGUUUGAAUUGAAAUUAAGAUACUGAUUCAAGUUCUUCUCUUCGGAUCAAAUAGAUACAUAUCUGAAAGAGUUGAGAA