ncRNA ID | novel_gra_miR581 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:7907198-7907363 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAUGACUUUUAGCGGCGUUUG - 21 |
Stem-loop(if miRNA) |
--AGU              CCAAACAA          U  -GGGAA               A  A AC              GU      GCCGCUAAAGGUCA        UAGCGACGUU GU      AAGCGCCGCUAAAGA UA G  CUUUAGCGGUGUUU  G      ||||||||||||||        |||||||||| ||      ||||||||||||||| || |  ||||||||||||||  G      CGGCGAUUUUCAGU        AUCGCUGCGA CA      UUUGCGGCGAUUUCU GU C  GAAAUCGCCACGAA  G GUUUG              -ACAAGAA          -  AGAGUG               A  A AA              AA |
Stem-loop sequence | AGUGCCGCUAAAGGUCACCAAACAAUAGCGACGUUUGUGGGAAAAGCGCCGCUAAAGAAUAAGACCUUUAGCGGUGUUUGUGGGAAAAGCACCGCUAAAGAACAUGAUCUUUAGCGGCGUUUGUGAGAACAGCGUCGCUAAAGAACAUGACUUUUAGCGGCGUUUG |