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BaseInfo

ncRNA ID novel_gra_miR581
Species Gossypium raimondii
Class miRNA
Genome position Chr1:7907198-7907363 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 21
Mature sequence(if miRNA) 1 - CAUGACUUUUAGCGGCGUUUG - 21
Stem-loop(if miRNA) --AGU              CCAAACAA          U  -GGGAA               A  A AC              GU
     GCCGCUAAAGGUCA        UAGCGACGUU GU      AAGCGCCGCUAAAGA UA G  CUUUAGCGGUGUUU  G
     ||||||||||||||        |||||||||| ||      ||||||||||||||| || |  ||||||||||||||  G
     CGGCGAUUUUCAGU        AUCGCUGCGA CA      UUUGCGGCGAUUUCU GU C  GAAAUCGCCACGAA  G
GUUUG              -ACAAGAA          -  AGAGUG               A  A AA              AA
Stem-loop sequence AGUGCCGCUAAAGGUCACCAAACAAUAGCGACGUUUGUGGGAAAAGCGCCGCUAAAGAAUAAGACCUUUAGCGGUGUUUGUGGGAAAAGCACCGCUAAAGAACAUGAUCUUUAGCGGCGUUUGUGAGAACAGCGUCGCUAAAGAACAUGACUUUUAGCGGCGUUUG