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BaseInfo

ncRNA ID	novel_gra_miR577
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr1:9256761-9256805 [-]
Reference genome	Graimondii2_0
Source	SRR616257
Length	21
Mature sequence(if miRNA)	25 - UUCUGGCCACCGUAGACGGCG - 45
Stem-loop(if miRNA)	--        A   UA         UUCUGGCC CCG  GACGGCG   |||||||| |||  ||||||G   GAGACCGG GGC  CUGCCGA AC        C   CG
Stem-loop sequence	UUCUGGCCACCGUAGACGGCGGAGCCGUCGCCGGCGGCCAGAGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012593162.1	ncRNA:21   GCGGCAGAUGCCACCGGUCUU   1   ||||*||||||||||||=||| targets:262   CGCCAUCUACGGUGGCCGGAA   282 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105771763 (LOC105771763), mRNA	uncharacterized LOC105771763(LOC105771763)	coding protein	psRNATarget
XM_012606089.1	ncRNA:21   GCGGCAGAUGCCACCGGUCUU   1   |||||||*|||||||||=||| targets:105   CGCCGUCCACGGUGGCCGGAA   125 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105781562 (LOC105781562), mRNA	uncharacterized LOC105781562(LOC105781562)	coding protein	psRNATarget
XM_012597684.1	ncRNA:21   GCGGCAGAUGCCACCGGUCUU   1   =|*||||||||||||||=||| targets:159   UGACGUCUACGGUGGCCGGAA   179 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105775151 (LOC105775151), mRNA	uncharacterized LOC105775151(LOC105775151)	coding protein	psRNATarget