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BaseInfo

ncRNA ID novel_gra_miR576
Species Gossypium raimondii
Class miRNA
Genome position Chr1:10701707-10701908 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - AUGAAACUGUGAUUCCACAUCAUC - 24
Stem-loop(if miRNA) --   A              A                CC  C                        C  UC       CACAU     UCUCC    AAAAA
  AUG AACUGUGAUUCCAC UCAUCCUUAUCCCUUU  AA GGGAGAAUGACAAAUCAGAUUUUU CU  UGAUUUU     UUUUU     UGGA     A
  ||| |||||||||||||| ||||||||||||||||  || |||||||||||||||||||||||| ||  |||||||     |||||     ||||
  UAC UUGACGCUAAGGUG AGUAGGAAUAGGGAAA  UU CCCUUUUACUGUUUAGUCUAAAAA GA  AUUAAAG     AAAAA     ACCU     U
CA   C              C                AA  A                        A  GA       AUCAU     --UCA    AAACU
Stem-loop sequence AUGAAACUGUGAUUCCACAUCAUCCUUAUCCCUUUCCAACGGGAGAAUGACAAAUCAGAUUUUUCCUUCUGAUUUUCACAUUUUUUUCUCCUGGAAAAAAAUUCAAAUCCAACUAAAAAUACUAGAAAUUAAGAGAAAAAAUCUGAUUUGUCAUUUUCCCAUUAAAAAGGGAUAAGGAUGACGUGGAAUCGCAGUUCCAUAC