ncRNA ID | novel_gra_miR576 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:10701707-10701908 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAAACUGUGAUUCCACAUCAUC - 24 |
Stem-loop(if miRNA) |
--   A              A                CC  C                        C  UC       CACAU     UCUCC    AAAAA   AUG AACUGUGAUUCCAC UCAUCCUUAUCCCUUU  AA GGGAGAAUGACAAAUCAGAUUUUU CU  UGAUUUU     UUUUU     UGGA     A   ||| |||||||||||||| ||||||||||||||||  || |||||||||||||||||||||||| ||  |||||||     |||||     ||||   UAC UUGACGCUAAGGUG AGUAGGAAUAGGGAAA  UU CCCUUUUACUGUUUAGUCUAAAAA GA  AUUAAAG     AAAAA     ACCU     U CA   C              C                AA  A                        A  GA       AUCAU     --UCA    AAACU |
Stem-loop sequence | AUGAAACUGUGAUUCCACAUCAUCCUUAUCCCUUUCCAACGGGAGAAUGACAAAUCAGAUUUUUCCUUCUGAUUUUCACAUUUUUUUCUCCUGGAAAAAAAUUCAAAUCCAACUAAAAAUACUAGAAAUUAAGAGAAAAAAUCUGAUUUGUCAUUUUCCCAUUAAAAAGGGAUAAGGAUGACGUGGAAUCGCAGUUCCAUAC |