ncRNA ID | novel_gra_miR574 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:10701702-10701903 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 182 - AUGGAACUGCGAUUCCACGUC - 202 |
Stem-loop(if miRNA) |
--         C                                  A                      CUUAAUUU    UAUUUUUAGUUGGAUUUGAAUU   AUGGAACUG GAUUCCACGUCAUCCUUAUCCCUUUUUAAUGGGA AAUGACAAAUCAGAUUUUUUCU        CUAG                      U   ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||                      U   UACUUUGAC CUAAGGUGUAGUAGGAAUAGGGAAAGGUUGCCCU UUACUGUUUAGUCUAAAAAGGA        CUAA                      U CA         A                                  C                      -----AGA    AAGUGUAAAAAAAGAGGACCUU |
Stem-loop sequence | AUGGAACUGCGAUUCCACGUCAUCCUUAUCCCUUUUUAAUGGGAAAAUGACAAAUCAGAUUUUUUCUCUUAAUUUCUAGUAUUUUUAGUUGGAUUUGAAUUUUUUUCCAGGAGAAAAAAAUGUGAAAAUCAGAAGGAAAAAUCUGAUUUGUCAUUCUCCCGUUGGAAAGGGAUAAGGAUGAUGUGGAAUCACAGUUUCAUAC |