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BaseInfo

ncRNA ID novel_gra_miR574
Species Gossypium raimondii
Class miRNA
Genome position Chr1:10701702-10701903 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 21
Mature sequence(if miRNA) 182 - AUGGAACUGCGAUUCCACGUC - 202
Stem-loop(if miRNA) --         C                                  A                      CUUAAUUU    UAUUUUUAGUUGGAUUUGAAUU
  AUGGAACUG GAUUCCACGUCAUCCUUAUCCCUUUUUAAUGGGA AAUGACAAAUCAGAUUUUUUCU        CUAG                      U
  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||                      U
  UACUUUGAC CUAAGGUGUAGUAGGAAUAGGGAAAGGUUGCCCU UUACUGUUUAGUCUAAAAAGGA        CUAA                      U
CA         A                                  C                      -----AGA    AAGUGUAAAAAAAGAGGACCUU
Stem-loop sequence AUGGAACUGCGAUUCCACGUCAUCCUUAUCCCUUUUUAAUGGGAAAAUGACAAAUCAGAUUUUUUCUCUUAAUUUCUAGUAUUUUUAGUUGGAUUUGAAUUUUUUUCCAGGAGAAAAAAAUGUGAAAAUCAGAAGGAAAAAUCUGAUUUGUCAUUCUCCCGUUGGAAAGGGAUAAGGAUGAUGUGGAAUCACAGUUUCAUAC