ncRNA ID | novel_gra_miR566 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:4949020-4949088 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 46 - CUGAAGACUAAGAGCUUUAGCGGC - 69 |
Stem-loop(if miRNA) |
--        G G       A        CUUCU   CGCUAAAG U UUGGUCU UAGCGGCG     A   |||||||| | ||||||| ||||||||     U   GCGAUUUC A AAUCAGA GUCGCCGC     C CG        G G       A        AAACA |
Stem-loop sequence | CGCUAAAGGUGUUGGUCUAUAGCGGCGCUUCUAUCACAAACGCCGCUGAAGACUAAGAGCUUUAGCGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012604455.1 |
|
3.0 | PREDICTED: Gossypium raimondii protein NDR1-like (LOC105780240), mRNA | protein NDR1-like(LOC105780240) | coding protein | psRNATarget |