ncRNA ID | novel_gra_miR565 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:44424887-44424980 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 71 - AGCAUCUCGCACUGGCGUGGACGC - 94 |
Stem-loop(if miRNA) |
--           C            UA           C   UC U   GUCCAUGUCAG GCGAGAUGCUGA  UGGAAGGAAAU GCG  C U   ||||||||||| ||||||||||||  ||||||||||| |||  |   CAGGUGCGGUC CGCUCUACGACU  ACCUUCCUUUA CGC  G G CG           A            GC           A   CC A |
Stem-loop sequence | GUCCAUGUCAGCGCGAGAUGCUGAUAUGGAAGGAAAUCGCGUCCUUGAGCCCGCAAUUUCCUUCCACGUCAGCAUCUCGCACUGGCGUGGACGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012627277.1 |
|
2.5 | PREDICTED: Gossypium raimondii polyadenylate-binding protein 2-like (LOC105797316), mRNA | polyadenylate-binding protein 2-like(LOC105797316) | coding protein | psRNATarget |