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BaseInfo

ncRNA ID novel_gra_miR564
Species Gossypium raimondii
Class miRNA
Genome position Chr1:19028398-19028538 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - CUAAUGCUUAGGGCUUUAGCGGCA - 24
Stem-loop(if miRNA) --       U    AG   U               G           A     A   --C  UC  ----   A
  CCGCUAA GCUC  GGC UUAGCGGCGUUUUCG GAAAGCGCCGC AAAUC CCU   AG  CA    ACG C
  ||||||| ||||  ||| ||||||||||||||| ||||||||||| ||||| |||   ||  ||    |||
  GGCGAUU CGGG  UCG AAUCGCCGCGAAAGU UUUUUGCGGCG UUUAG GGG   UC  GU    UGC G
AC       U    AU   U               A           A     -   CUU  GA  AUUU   C
Stem-loop sequence CCGCUAAUGCUCAGGGCUUUAGCGGCGUUUUCGGGAAAGCGCCGCAAAAUCACCUCAGUCCAACGACGCCGUUUUAUGAGCUUUCGGGGAUUUAGCGGCGUUUUUAUGAAAGCGCCGCUAAUGCUUAGGGCUUUAGCGGCA