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BaseInfo

ncRNA ID novel_gra_miR563
Species Gossypium raimondii
Class miRNA
Genome position Chr1:19028289-19028419 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 108 - AAUGCUUAGGGCUUUAGCGGCAUU - 131
Stem-loop(if miRNA) ---AAU    A G  U               G           A     A   --C  UC  -AU   
      GCUU G GC UUAGCGGCAUUUUUG GAAAGCGCCGC AAAUC CCU   AG  CA   GACG
      |||| | || ||||||||||||||| ||||||||||| ||||| |||   ||  ||   |||C
      UGGA C CG AAUCGCCGUGAAAGU UUUUUGCGGCG UUUAG GGA   UC  GU   UUGC
GAUUUC    - G  U               A           A     -   CUU  GA  AUU   
Stem-loop sequence AAUGCUUAGGGCUUUAGCGGCAUUUUUGGGAAAGCGCCGCAAAAUCACCUCAGUCCAAUGACGCCGUUUUAUGAGCUUUCAGGGAUUUAGCGGCGUUUUUAUGAAAGUGCCGCUAAUGCGCAGGUCUUUAG