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BaseInfo

ncRNA ID novel_gra_miR562
Species Gossypium raimondii
Class miRNA
Genome position Chr11:41645328-41645412 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 21
Mature sequence(if miRNA) 65 - CGGGGUCAUCGCCUUCGGUGG - 85
Stem-loop(if miRNA) --          GC          G   C      UACACCC
  ACCGAAGGUG  GACCUUGUUA UAU ACCUGU       A
  ||||||||||  |||||||||| ||| ||||||       G
  UGGCUUCCGC  CUGGGGCAAU AUA UGGACA       A
GG          UA          G   U      CUUUCUU
Stem-loop sequence ACCGAAGGUGGCGACCUUGUUAGUAUCACCUGUUACACCCAGAUUCUUUCACAGGUUAUAGUAACGGGGUCAUCGCCUUCGGUGG