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BaseInfo

ncRNA ID novel_gra_miR558
Species Gossypium raimondii
Class miRNA
Genome position Chr11:39281744-39281821 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 55 - AUGGGCUUAAAAAUUUGUCCAAGC - 78
Stem-loop(if miRNA) --UCA      A           -     ---UA  UU  A
     GAUAAA UUUUAGGCUCG GUUUC     GG  CG G
     |||||| ||||||||||| |||||     ||  ||
     CUGUUU AAAAUUCGGGU UAAAG     CC  GC C
CGAAC      A           A     UCCUG  CU  C
Stem-loop sequence UCAGAUAAAAUUUUAGGCUCGGUUUCUAGGUUCGAGCCCGUCCCGUCCUGAAAUAUGGGCUUAAAAAUUUGUCCAAGC