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BaseInfo

ncRNA ID novel_gra_miR556
Species Gossypium raimondii
Class miRNA
Genome position Chr11:39059130-39059195 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - CGUAUCGGGAAUUCGAGACAUCGU - 24
Stem-loop(if miRNA) --   --        UUC    C         UAA
  CGU  AUCGGGAA   GAGA AUCGUGUCC   C
  |||  ||||||||   |||| |||||||||   U
  GCA  UAGUUCUU   CUCU UAGUAUAGG   U
GU   AU        --U    -         UCA
Stem-loop sequence CGUAUCGGGAAUUCGAGACAUCGUGUCCUAACUUACUGGAUAUGAUUCUCUUUCUUGAUUAACGUG