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BaseInfo

ncRNA ID novel_gra_miR555
Species Gossypium raimondii
Class miRNA
Genome position Chr11:35638235-35638329 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 21
Mature sequence(if miRNA) 75 - UUGGCAACAUUCUUUGGCAUC - 95
Stem-loop(if miRNA) --   UG  --U     AUUAA UU    U    GUC    UU  GUUUUUA
  UGC  AA   UGUUG     C  GGCG GAUU   CUUG  GC       G
  |||  ||   |||||     |  |||| ||||   ||||  ||       C
  ACG  UU   ACAAC     G  UUGU CUAA   GAAC  CG       C
CU   GU  CUU     ----G UU    -    ---    UU  AACCUUA
Stem-loop sequence UGCUGAAUUGUUGAUUAACUUGGCGUGAUUGUCCUUGUUGCGUUUUUAGCCAUUCCAAGCUUCAAGAAUCUGUUUUGGCAACAUUCUUUGGCAUC