ncRNA ID | novel_gra_miR550 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:26572986-26573126 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 118 - CUAAUGCCUAGGGCUUUAGCGGCG - 141 |
Stem-loop(if miRNA) |
--       U    G    U          UUUUGG           A   AAA   --    ----CC    A   CCGCUAA GCUC GGGU UUAGCGGCAU      GAAAGCGCCGC AAA   CCU  AAGC      AACG C   ||||||| |||| |||| ||||||||||      ||||||||||| |||   |||  ||||      ||||   GGCGAUU CGGG UCCG AAUCGCCGUG      UUUUUGCGGCG UUU   GGG  UUCG      UUGC U GC       U    A    U          UAUGAA           A   -AG   CU    AAUUUU    C |
Stem-loop sequence | CCGCUAAUGCUCGGGGUUUUAGCGGCAUUUUUGGGAAAGCGCCGCAAAAAAACCUAAGCCCAACGACUCCGUUUUUUAAGCUUUCGGGGAUUUAGCGGCGUUUUUAAGUAUGUGCCGCUAAUGCCUAGGGCUUUAGCGGCG |