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BaseInfo

ncRNA ID	novel_gra_miR542
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr1:37672096-37672150 [-]
Reference genome	Graimondii2_0
Source	SRR616257
Length	24
Mature sequence(if miRNA)	1 - GAUCUCCGGAUGAAGAUCUGGCAU - 24
Stem-loop(if miRNA)	GCU      UCGAUCUCUGGGUCGUA    GAUUUC                 U    ||||||                 U    GGUCUA                 C UAC      GAAGUAGGCCUCUAGAG
Stem-loop sequence	GCUGAUUUCUCGAUCUCUGGGUCGUAUUCGAGAUCUCCGGAUGAAGAUCUGGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012617100.1	ncRNA:24   UAC-GGUCUAGAAGUAGGCCUCUAG   1   |||-|||||||||=||||||||||| targets:66   AUGACCAGAUCUUUAUCCGGAGAUC   90 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105789737 (LOC105789737), partial mRNA	uncharacterized LOC105789737(LOC105789737)	coding protein	psRNATarget
XM_012627362.1	ncRNA:24   UACGGUCUAGAAGUAGGCCUCUAG   1   |**=||*|||||||||=||||||| targets:1118   AGAUCAAAUCUUCAUCUGGAGAUC   1141 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii uncharacterized LOC105797379 (LOC105797379), mRNA	uncharacterized LOC105797379(LOC105797379)	coding protein	psRNATarget