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BaseInfo

ncRNA ID novel_gra_miR540
Species Gossypium raimondii
Class miRNA
Genome position Chr1:38772353-38772417 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 42 - AGAUACACGGGCGUGUGUCUCAGC - 65
Stem-loop(if miRNA) --A      CG G     -    C         
   GAUACA  G CGUGU GUCU AGCCGUGUGU
   ||||||  | ||||| |||| |||||||||G
   CUGUGU  C GCACA CAGA UCGGUACACA
CCC      AU G     G    -         
Stem-loop sequence AGAUACACGGGCGUGUGUCUCAGCCGUGUGUGACACAUGGCUAGACGACACGGCUAUGUGUCCCC