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BaseInfo

ncRNA ID	novel_gra_miR535
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr1:42061474-42061526 [-]
Reference genome	Graimondii2_0
Source	SRR616257
Length	24
Mature sequence(if miRNA)	1 - GCUGACGUGGACGCGAUUUGCUGC - 24
Stem-loop(if miRNA)	--                      AA   AGUAAAUCGUGUCCACGUCAGC  A   ||||||||||||||||||||||  G   UCGUUUAGCGCAGGUGCAGUCG  C CG                      CG
Stem-loop sequence	AGUAAAUCGUGUCCACGUCAGCAAAGCGCGCUGACGUGGACGCGAUUUGCUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012622070.1	ncRNA:24   CGUCGUUUAGCGCAGGUGCAGUCG   1   *||*|||||||||||||||||||| targets:1123   UCAACAAAUCGCGUCCACGUCAGC   1146 Target Full Sequence	0.0	PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA	uncharacterized LOC105793143(LOC105793143)	coding protein	psRNATarget
XM_012622070.1	ncRNA:24   CGUCGUUUAGCGCAGGUGCAGUCG   1   *|***||||||||||=|||||||| targets:1081   UCCUAAAAUCGCGUCUACGUCAGC   1104 Target Full Sequence	1.5	PREDICTED: Gossypium raimondii uncharacterized LOC105793143 (LOC105793143), mRNA	uncharacterized LOC105793143(LOC105793143)	coding protein	psRNATarget
XM_012584841.1	ncRNA:24   CGUCGUU-UAGCGCAGGUGCAGUCG   1   *||*|||-||*|||||||||||||| targets:925   CCAUCAACAUGGCGUCCACGUCAGC   949 Target Full Sequence	3.0	PREDICTED: Gossypium raimondii transcription factor MYB108-like (LOC105765640), mRNA	transcription factor MYB108-like(LOC105765640)	coding protein	psRNATarget