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BaseInfo

ncRNA ID novel_gra_miR534
Species Gossypium raimondii
Class miRNA
Genome position Chr1:42793451-42793656 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 183 - AAGGCCUGAGCAUUAGCGGCGCUU - 206
Stem-loop(if miRNA) --    CC          C   G      C    AC       A   CC               -C    UCAAAAA    -------   A      --   AAA  UAG
  AAGG  UGAGCAUUAG GGC CUUUAU AAAA  GCCGCUA AGG  UAAGCAUUAGCGGCG  UUCC       CGCC       ACU AAGCCC  CGA   CU   A
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  UUCC  GCUCGUAAUC CCG GAAAUA UUUU  CGGCGAU UUU  AUUCGUAAUCGCUGC  AAGG       GCGG       UGA UUCGGG  GCU   GG   A
AU    -A          A   A      A    -A       A   --               AA    -UGCUUC    CGUUUUU   A      UU   -GC  CAA
Stem-loop sequence AAGGCCUGAGCAUUAGCGGCGCUUUAUCAAAAACGCCGCUAAAGGCCUAAGCAUUAGCGGCGCUUCCUCAAAAACGCCACUAAAGCCCCGAAAACUUAGAAAACGGCGUCGUUGGGCUUAAGUUUUUUGCGGCGCUUCGUGGAAAACGUCGCUAAUGCUUAUUUAUAGCGGCAUUUUAAUAAAGAGCCACUAAUGCUCGACCUUUA