ncRNA ID | novel_gra_miR534 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr1:42793451-42793656 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 183 - AAGGCCUGAGCAUUAGCGGCGCUU - 206 |
Stem-loop(if miRNA) |
--    CC          C   G      C    AC       A   CC               -C    UCAAAAA    -------   A      --   AAA  UAG   AAGG  UGAGCAUUAG GGC CUUUAU AAAA  GCCGCUA AGG  UAAGCAUUAGCGGCG  UUCC       CGCC       ACU AAGCCC  CGA   CU   A   ||||  |||||||||| ||| |||||| ||||  ||||||| |||  |||||||||||||||  ||||       ||||       ||| ||||||  |||   ||   UUCC  GCUCGUAAUC CCG GAAAUA UUUU  CGGCGAU UUU  AUUCGUAAUCGCUGC  AAGG       GCGG       UGA UUCGGG  GCU   GG   A AU    -A          A   A      A    -A       A   --               AA    -UGCUUC    CGUUUUU   A      UU   -GC  CAA |
Stem-loop sequence | AAGGCCUGAGCAUUAGCGGCGCUUUAUCAAAAACGCCGCUAAAGGCCUAAGCAUUAGCGGCGCUUCCUCAAAAACGCCACUAAAGCCCCGAAAACUUAGAAAACGGCGUCGUUGGGCUUAAGUUUUUUGCGGCGCUUCGUGGAAAACGUCGCUAAUGCUUAUUUAUAGCGGCAUUUUAAUAAAGAGCCACUAAUGCUCGACCUUUA |