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BaseInfo

ncRNA ID novel_gra_miR533
Species Gossypium raimondii
Class miRNA
Genome position Chr9:23600793-23600904 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - AGAAGUAUGCUCUGUGCUUGCCAU - 24
Stem-loop(if miRNA) -- A                          -A   GAGA    C    A      UU
  G CAAGCACAGAGCAUACUUCUAAACUU  CUG    UUUU UUUC UUGAUA  C
  | ||||||||||||||||||||||||||  |||    |||| |||| ||||||
  C GUUCGUGUCUCGUAUGAAGAUUUGGA  GAU    GAGA AAAG GAUUAU  C
UA C                          GA   -AAG    A    A      UC
Stem-loop sequence GACAAGCACAGAGCAUACUUCUAAACUUACUGGAGAUUUUCUUUCAUUGAUAUUCCCUUAUUAGAGAAAAAGAGGAAUAGAGAGGUUUAGAAGUAUGCUCUGUGCUUGCCAU