ncRNA ID | novel_gra_miR533 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:23600793-23600904 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAGUAUGCUCUGUGCUUGCCAU - 24 |
Stem-loop(if miRNA) |
-- A                          -A   GAGA    C    A      UU   G CAAGCACAGAGCAUACUUCUAAACUU  CUG    UUUU UUUC UUGAUA  C   | ||||||||||||||||||||||||||  |||    |||| |||| ||||||   C GUUCGUGUCUCGUAUGAAGAUUUGGA  GAU    GAGA AAAG GAUUAU  C UA C                          GA   -AAG    A    A      UC |
Stem-loop sequence | GACAAGCACAGAGCAUACUUCUAAACUUACUGGAGAUUUUCUUUCAUUGAUAUUCCCUUAUUAGAGAAAAAGAGGAAUAGAGAGGUUUAGAAGUAUGCUCUGUGCUUGCCAU |