ncRNA ID | novel_gra_miR523 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:1400877-1401101 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 202 - AUAAGGGCUUCCAUGAUGCUUUUA - 225 |
Stem-loop(if miRNA) |
--      --   U      UC    A    C  AA  U           UCU            AG  -             ------A    CGGU   AAUGAAUGAAAUCUUUAA   AAAGUA  AUG GAAGCU  UGUA UAGG GU  GA UACAUUUUGCU   UUUACUAAAAAA  AA UAAAUUAGUCUUU       UAUG    AGA                  C   ||||||  ||| ||||||  |||| |||| ||  || |||||||||||   ||||||||||||  || |||||||||||||       ||||    |||                  A   UUUCGU  UAC CUUCGG  AUAU AUUC CA  CU AUGUAAAAUGA   AGAUGAUUUUUU  UU AUUUAAUCAGGAA       UCUA    GUU                  U AU      AG   -      GA    G    U  AC  U           UAU            AA  C             CAUGUAA    ----   UCUCGUUAGACUAGGAAA |
Stem-loop sequence | AAAGUAAUGUGAAGCUUCUGUAAUAGGCGUAAGAUUACAUUUUGCUUCUUUUACUAAAAAAAGAAUAAAUUAGUCUUUAUAUGCGGUAGAAAUGAAUGAAAUCUUUAACAUAAAGGAUCAGAUUGCUCUUUGAUCUAAUGUACAAGGACUAAUUUACUUAAUUUUUUAGUAGAUAUAGUAAAAUGUAUUCCAACUCUUAGUAUAAGGGCUUCCAUGAUGCUUUUA |