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BaseInfo

ncRNA ID novel_gra_miR523
Species Gossypium raimondii
Class miRNA
Genome position Chr11:1400877-1401101 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 202 - AUAAGGGCUUCCAUGAUGCUUUUA - 225
Stem-loop(if miRNA) --      --   U      UC    A    C  AA  U           UCU            AG  -             ------A    CGGU   AAUGAAUGAAAUCUUUAA
  AAAGUA  AUG GAAGCU  UGUA UAGG GU  GA UACAUUUUGCU   UUUACUAAAAAA  AA UAAAUUAGUCUUU       UAUG    AGA                  C
  ||||||  ||| ||||||  |||| |||| ||  || |||||||||||   ||||||||||||  || |||||||||||||       ||||    |||                  A
  UUUCGU  UAC CUUCGG  AUAU AUUC CA  CU AUGUAAAAUGA   AGAUGAUUUUUU  UU AUUUAAUCAGGAA       UCUA    GUU                  U
AU      AG   -      GA    G    U  AC  U           UAU            AA  C             CAUGUAA    ----   UCUCGUUAGACUAGGAAA
Stem-loop sequence AAAGUAAUGUGAAGCUUCUGUAAUAGGCGUAAGAUUACAUUUUGCUUCUUUUACUAAAAAAAGAAUAAAUUAGUCUUUAUAUGCGGUAGAAAUGAAUGAAAUCUUUAACAUAAAGGAUCAGAUUGCUCUUUGAUCUAAUGUACAAGGACUAAUUUACUUAAUUUUUUAGUAGAUAUAGUAAAAUGUAUUCCAACUCUUAGUAUAAGGGCUUCCAUGAUGCUUUUA