ncRNA ID | novel_gra_miR522 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:10453863-10453942 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUGACACUUUGAGAUUGUGCCAC - 24 |
Stem-loop(if miRNA) |
--                            A  C   AAA   UAUGACACUUUGAGAUUGUGCCACAUUA CA UUA   A   |||||||||||||||||||||||||||| || |||   AUAUUGUGAGAUUCUAACAUGGUGUAGU GU GAU   U UU                            A  A   AAA |
Stem-loop sequence | UAUGACACUUUGAGAUUGUGCCACAUUAACACUUAAAAAUAAAUAGAUGAUGAUGUGGUACAAUCUUAGAGUGUUAUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012592353.1 |
|
2.5 | PREDICTED: Gossypium raimondii putative pumilio homolog 8, chloroplastic (LOC105770970), mRNA | putative pumilio homolog 8, chloroplastic(LOC105770970) | coding protein | psRNATarget |