ncRNA ID | novel_gra_miR518 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr11:23421610-23421759 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAAUGCUUGGGGCUUUAGCGGCG - 24 |
Stem-loop(if miRNA) |
--       U    G    U              GA              UU        U            GU   CCGCUAA GCUC GGGU UUAGCGGCGUUUUU  AAAAGCACCGCUAA  CUCUGGGC UUAGCGGCGUUU  G   ||||||| |||| |||| ||||||||||||||  ||||||||||||||  |||||||| ||||||||||||   GGCGAUU CGGG UUCG AAUCGCCGUGAAAA  UUUUUGUGGCGAUU  GGGGCCCG AAUCGCCGUGAA  G GC       U    G    U              GG              UC        U            AA |
Stem-loop sequence | CCGCUAAUGCUCGGGGUUUUAGCGGCGUUUUUGAAAAAGCACCGCUAAUUCUCUGGGCUUUAGCGGCGUUUGUGGAAAAGUGCCGCUAAUGCCCGGGGCUUUAGCGGUGUUUUUGGAAAAGUGCCGCUAAUGCUUGGGGCUUUAGCGGCG |