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BaseInfo

ncRNA ID novel_gra_miR518
Species Gossypium raimondii
Class miRNA
Genome position Chr11:23421610-23421759 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - CUAAUGCUUGGGGCUUUAGCGGCG - 24
Stem-loop(if miRNA) --       U    G    U              GA              UU        U            GU
  CCGCUAA GCUC GGGU UUAGCGGCGUUUUU  AAAAGCACCGCUAA  CUCUGGGC UUAGCGGCGUUU  G
  ||||||| |||| |||| ||||||||||||||  ||||||||||||||  |||||||| ||||||||||||
  GGCGAUU CGGG UUCG AAUCGCCGUGAAAA  UUUUUGUGGCGAUU  GGGGCCCG AAUCGCCGUGAA  G
GC       U    G    U              GG              UC        U            AA
Stem-loop sequence CCGCUAAUGCUCGGGGUUUUAGCGGCGUUUUUGAAAAAGCACCGCUAAUUCUCUGGGCUUUAGCGGCGUUUGUGGAAAAGUGCCGCUAAUGCCCGGGGCUUUAGCGGUGUUUUUGGAAAAGUGCCGCUAAUGCUUGGGGCUUUAGCGGCG