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BaseInfo

ncRNA ID novel_gra_miR516
Species Gossypium raimondii
Class miRNA
Genome position Chr11:30237733-30237844 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 25
Mature sequence(if miRNA) 1 - CUAAAGAUCAUGUUCUUUAGCGGCU - 25
Stem-loop(if miRNA) --          U    U            ------      AAAAAA A      AAAGUA
  CCGCUAAAGA CAUG UCUUUAGCGGCG      CUUAGG      C CCGCUA      A
  |||||||||| |||| ||||||||||||      ||||||      | ||||||
  GGCGAUUUCU GUAC AGAAAUCGCCGC      GGGUUC      G GGCGAU      U
UC          U    U            AAAAAA      ------ C      AUAUUG
Stem-loop sequence CCGCUAAAGAUCAUGUUCUUUAGCGGCGCUUAGGAAAAAACACCGCUAAAAGUAAUGUUAUAUAGCGGCGCUUGGGAAAAAACGCCGCUAAAGAUCAUGUUCUUUAGCGGCU