| ncRNA ID | novel_gra_miR514 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr9:25767959-25768164 [-] |
| Reference genome | Graimondii2_0 |
| Source | SRR616255 |
| Length | 24 |
| Mature sequence(if miRNA) | 183 - AUUGUAUGAAACUGUGAUUUCAUG - 206 |
| Stem-loop(if miRNA) |
-- CAU C CC A - CAG U - -CCCU AAAA AUUGUAUGAAACUGUGAUUUCAUGU C CUAUU UUUUCAAUA GAA AAUGACAAAU AUUUUUUCUCC GAUAUUCAAC UUUUU GA U ||||||||||||||||||||||||| | ||||| ||||||||| ||| |||||||||| ||||||||||| |||||||||| ||||| || UAACAUAUUUUGACACUAAAGUGCA G GAUAG AAAAGUUAU CUU UUACUGUUUA UAAAAAAGAGG CUAUAAGUUG AAAAA CU U UC AUU A UA - C AUA U U UCAAU AAUU |
| Stem-loop sequence | AUUGUAUGAAACUGUGAUUUCAUGUCAUCCCUAUUCCUUUUCAAUAAGAAAAUGACAAAUCAGAUUUUUUCUCCUGAUAUUCAACUUUUUCCCUGAAAAAUUUUAAUCUAACUAAAAAUGUUGAAUAUCUGGAGAAAAAAUAUAAUUUGUCAUUCUUCUAUUGAAAAAUGAUAGAGUUAACGUGAAAUCACAGUUUUAUACAAUCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012613692.1 |
|
1.5 | PREDICTED: Gossypium raimondii probable WRKY transcription factor 9 (LOC105787323), mRNA | probable WRKY transcription factor 9(LOC105787323) | coding protein | psRNATarget | |||||||||
| XM_012610392.1 |
|
3.0 | PREDICTED: Gossypium raimondii pentatricopeptide repeat-containing protein At3g13880 (LOC105784486), transcript variant X1, mRNA | pentatricopeptide repeat-containing protein At3g13880(LOC105784486) | coding protein | psRNATarget |