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BaseInfo

ncRNA ID novel_gra_miR509
Species Gossypium raimondii
Class miRNA
Genome position Chr9:44604853-44604919 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 44 - GCUAAUGCUCGGGCUUUAGCGGCG - 67
Stem-loop(if miRNA) --       U    A   UU         C   U
  CCGCUAA GCUC AGC  UUAGCGACG UUU U
  ||||||| |||| |||  ||||||||| |||
  GGCGAUU CGGG UCG  AAUCGCUGC AAA C
GC       U    C   -U         A   A
Stem-loop sequence CCGCUAAUGCUCAAGCUUUUAGCGACGCUUUUUCAAAAACGUCGCUAAUGCUCGGGCUUUAGCGGCG