ncRNA ID | novel_gra_miR500 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:3122366-3122489 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 101 - ACUACCAAUUCGACUUUCUGGUAU - 124 |
Stem-loop(if miRNA) |
--                  CAA              -----------------A    UCGACUGUCAU   AUUAGGAAGUUGAAUUGG   UGAAAAAAGAAGUA                  GAAG           C   ||||||||||||||||||   ||||||||||||||                  ||||           A   UGGUCUUUCAGCUUAACC   ACUUUUUUCUUCGU                  AAAC           U UA                  AUC              ACCAUACUCAAAUACCCA    CAAUAUCCGUU |
Stem-loop sequence | AUUAGGAAGUUGAAUUGGCAAUGAAAAAAGAAGUAAGAAGUCGACUGUCAUCAUUUGCCUAUAACCAAAACCCAUAAACUCAUACCAUGCUUCUUUUUUCACUACCAAUUCGACUUUCUGGUAU |