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BaseInfo

ncRNA ID novel_gra_miR499
Species Gossypium raimondii
Class miRNA
Genome position Chr9:19971823-19971966 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - AUGUGACAUGAUAACUCACGUGGC - 24
Stem-loop(if miRNA) ---AUG             C          CUAUC    C     AUAAUUAAAAAAAAUCAAAC   UCAUAAAAAUAU
      UGACAUGAUAACU ACGUGGCAAU     UAUA UUCAU                    UGU            A
      ||||||||||||| ||||||||||     |||| |||||                    |||            A
      AUUGUAUUAUUGA UGUAUCGUUA     AUAU AAGUA                    AUG            A
ACUGUA             A          AUCGU    A     ----------------AGAA   CACUCAUGAAAA
Stem-loop sequence AUGUGACAUGAUAACUCACGUGGCAAUCUAUCUAUACUUCAUAUAAUUAAAAAAAAUCAAACUGUUCAUAAAAAUAUAAAAAAAGUACUCACGUAAAGAAUGAAAUAUAUGCUAAUUGCUAUGUAAGUUAUUAUGUUAAUGUCA