ncRNA ID | novel_gra_miR499 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:19971823-19971966 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUGACAUGAUAACUCACGUGGC - 24 |
Stem-loop(if miRNA) |
---AUG             C          CUAUC    C     AUAAUUAAAAAAAAUCAAAC   UCAUAAAAAUAU       UGACAUGAUAACU ACGUGGCAAU     UAUA UUCAU                    UGU            A       ||||||||||||| ||||||||||     |||| |||||                    |||            A       AUUGUAUUAUUGA UGUAUCGUUA     AUAU AAGUA                    AUG            A ACUGUA             A          AUCGU    A     ----------------AGAA   CACUCAUGAAAA |
Stem-loop sequence | AUGUGACAUGAUAACUCACGUGGCAAUCUAUCUAUACUUCAUAUAAUUAAAAAAAAUCAAACUGUUCAUAAAAAUAUAAAAAAAGUACUCACGUAAAGAAUGAAAUAUAUGCUAAUUGCUAUGUAAGUUAUUAUGUUAAUGUCA |