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BaseInfo

ncRNA ID novel_gra_miR479
Species Gossypium raimondii
Class miRNA
Genome position Chr9:14188672-14188872 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 178 - AAAGACCCUGACCUUUAGCGGCGU - 201
Stem-loop(if miRNA) --          AA  U A             UUGCAAAAA              AA    AU  G           U GA --A               AC
  GCCGCUAAAG  CA G UCUUUAGCGGCGU         AAGCGCUGCUAAAG  CAUG  CU UAGCGGUGUUU A  C   AAGCGCCGCUAAAGA  A
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  CGGCGAUUUC  GU C AGAAAUCGCCGCG         UUCGCGGCGAUUUU  GUAC  GA AUCGCCACGAA U  G   UUUGCGGCGAUUUCU  U
UG          CA  C C             UAAAGGAUG              CA    AU  A           - AG GAG               AA
Stem-loop sequence GCCGCUAAAGAACAUGAUCUUUAGCGGCGUUUGCAAAAAAAGCGCUGCUAAAGAACAUGAUCUGUAGCGGUGUUUUAGACAAAGCGCCGCUAAAGAACAUAAUCUUUAGCGGCGUUUGAGGGAUAAGCACCGCUAAAGUACAUGACUUUUAGCGGCGCUUGUAGGAAAUGCGCCGCUAAAGACCCUGACCUUUAGCGGCGU