Search result

BaseInfo

ncRNA ID novel_gra_miR475
Species Gossypium raimondii
Class miRNA
Genome position Chr8:49482525-49482724 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - AUGAAACUGUGAUUUCACGUCAUU - 24
Stem-loop(if miRNA) --    A C          C             C     A          U                  C            -     CCUCCUUAAAAA
  AUGA A UGUGAUUUCA GUCAUUUUUAUCC UUUUC AUAGGAGAAU GCAAAUUAGAUUUUUCUU CUAAUUUUUAGC UUUUU            A
  |||| | |||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||||||| |||||            A
  UACU U AUACUAAAGU CAGUAAGGAUAGG AAAGG UAUUCUCUUA UGUUUAAUCUAAAAAGGA GAUUAAAAAUCG AAAAA            U
UA    A A          A             U     C          C                  A            U     UCAAUCUAAAAU
Stem-loop sequence AUGAAACUGUGAUUUCACGUCAUUUUUAUCCCUUUUCAAUAGGAGAAUUGCAAAUUAGAUUUUUCUUCCUAAUUUUUAGCUUUUUCCUCCUUAAAAAAAUUAAAAUCUAACUAAAAAUGCUAAAAAUUAGAAGGAAAAAUCUAAUUUGUCAUUCUCUUAUCGGAAAUGGAUAGGAAUGACAUGAAAUCAUAAUAUCAUAU