ncRNA ID | novel_gra_miR475 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr8:49482525-49482724 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGAAACUGUGAUUUCACGUCAUU - 24 |
Stem-loop(if miRNA) |
--    A C          C             C     A          U                  C            -     CCUCCUUAAAAA   AUGA A UGUGAUUUCA GUCAUUUUUAUCC UUUUC AUAGGAGAAU GCAAAUUAGAUUUUUCUU CUAAUUUUUAGC UUUUU            A   |||| | |||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||||||| |||||            A   UACU U AUACUAAAGU CAGUAAGGAUAGG AAAGG UAUUCUCUUA UGUUUAAUCUAAAAAGGA GAUUAAAAAUCG AAAAA            U UA    A A          A             U     C          C                  A            U     UCAAUCUAAAAU |
Stem-loop sequence | AUGAAACUGUGAUUUCACGUCAUUUUUAUCCCUUUUCAAUAGGAGAAUUGCAAAUUAGAUUUUUCUUCCUAAUUUUUAGCUUUUUCCUCCUUAAAAAAAUUAAAAUCUAACUAAAAAUGCUAAAAAUUAGAAGGAAAAAUCUAAUUUGUCAUUCUCUUAUCGGAAAUGGAUAGGAAUGACAUGAAAUCAUAAUAUCAUAU |