ncRNA ID | novel_gra_miR462 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr8:7944596-7944822 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 204 - CUAAUGCUUGGGGCUUUAGCGGCG - 227 |
Stem-loop(if miRNA) |
--    U    G    U              GA      GC      U    G    U              GA              -U       G U                 CUAA GCUU GGGC UUAGCGGCGUUUUU  GAAAGC  CGCUAA GCUC GGGC UUAGCGGCGUUUUU  GAAAGCGCCGCUAA  GCUCGGG C UUAGCGGCGUUUUUU   |||| |||| |||| ||||||||||||||  ||||||  |||||| |||| |||| ||||||||||||||  ||||||||||||||  ||||||| | ||||||||||||||G   GAUU CGGG CUCG AAUCGCUGCGAAAG  UUUUUG  GCGAUU CGGG CUCG AAUCGCCGCGAAAG  UUUUUGCGGCGAUU  CGGGCUC G AAUCGCUGCGAAAGA GC    U    G    U              AG      AU      U    G    U              AG              UC       - U               |
Stem-loop sequence | CUAAUGCUUGGGGCUUUAGCGGCGUUUUUGAGAAAGCGCCGCUAAUGCUCGGGGCUUUAGCGGCGUUUUUGAGAAAGCGCCGCUAAUGCUCGGGGCUUUAGCGGCGUUUUUUGAGAAAGCGUCGCUAAUGCUCGGGCCUUUAGCGGCGUUUUUGAGAAAGCGCCGCUAAUGCUCGGGGCUUUAGCGUAGUUUUUGAGAAAGCGUCGCUAAUGCUCGGGGCUUUAGCG |