ncRNA ID | novel_gra_miR461 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr8:9804850-9804902 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 33 - UUGGUCUGAUUGAGCCGUGCC - 53 |
Stem-loop(if miRNA) |
--    UCU    --    C    CAAU   UUGG   GAUU  GAGC GUGC    A   ||||   ||||  |||| ||||    U   AGCC   CUAA  UUUG CAUG    C GG    --U    AC    U    AAUU |
Stem-loop sequence | UUGGUCUGAUUGAGCCGUGCCAAUAUCUUAAGUACUGUUUCAAAUCUCCGAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012601820.1 |
|
3.0 | PREDICTED: Gossypium raimondii pentatricopeptide repeat-containing protein At5g16860 (LOC105778175), mRNA | pentatricopeptide repeat-containing protein At5g16860(LOC105778175) | coding protein | psRNATarget |