ncRNA ID | novel_gra_miR450 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr8:44489906-44490015 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GACCUUGUCUAGGACAGUGGCAUC - 24 |
Stem-loop(if miRNA) |
--- A - A U CA GA U C -GACC G CCAC GUCU GGACGA GG UC UAUAUG GAUUA GUGUAA AUGUCU | |||| |||| |||||| || || |||||| ||||| |||||| |||||A C GGUG CAGG UCUGUU CC AG AUAUGC UUAGU UAUGUU UACAGG CUA - A A - -- -A - U ACGAU |
Stem-loop sequence | GACCACGUCUAGGACGAUGGCAUCGAUAUAUGUGAUUACGUGUAAGACCAUGUCUAGGACAUUAGCAUUGUAUUUGAUUCGUAUAAGACCUUGUCUAGGACAGUGGCAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012584719.1 |
|
3.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105765549 (LOC105765549), mRNA | uncharacterized LOC105765549(LOC105765549) | coding protein | psRNATarget |