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BaseInfo

ncRNA ID novel_gra_miR449
Species Gossypium raimondii
Class miRNA
Genome position Chr8:45394631-45394796 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - GAUUGAUUGAGAACAUGAGCGGCG - 24
Stem-loop(if miRNA) --  U                                                          C  ---UU  CUUACUUUUAU
  CC CUCAUGUUCUCAAUCAAUCAAGCUUUUCUCUCAAGGUUAUUCAUAAGAAUUUAGUUUG UC     UU           A
  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     ||           A
  GG GAGUACAAGAGUUAGUUAGUUCGAAAAGAGAGUUCCAAUAAGUAUUCUUAAAUUAAAC AG     UC           G
GC  C                                                          A  UAUUU  GUUCGAUUUAA
Stem-loop sequence CCUCUCAUGUUCUCAAUCAAUCAAGCUUUUCUCUCAAGGUUAUUCAUAAGAAUUUAGUUUGCUCUUUUCUUACUUUUAUAAGAAUUUAGCUUGCUUUUAUGAACAAAUUAAAUUCUUAUGAAUAACCUUGAGAGAAAAGCUUGAUUGAUUGAGAACAUGAGCGGCG