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BaseInfo

ncRNA ID novel_gra_miR448
Species Gossypium raimondii
Class miRNA
Genome position Chr10:33739683-33739828 [+]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 1 - GCUAAUGUUCUGGGCUUUAGCGGC - 24
Stem-loop(if miRNA) --     U    U    U        A   U    U            UA   UG   U        AA  UU
  GCUAA GUUC GGGC UUAGCGGC UUU UAUG AAGCGCUGCUAA  UUC  GGC UUAGCGGU  UU  A
  ||||| |||| |||| |||||||| ||| |||| ||||||||||||  |||  ||| ||||||||  ||
  CGAUU CGGG CUUG AAUCGCCG GAA GUAU UUUGCGGCGAUU  GGG  UUG AAUCGCCG  AA  U
GG     U    U    U        C   U    U            UC   UU   U        CG  UG
Stem-loop sequence GCUAAUGUUCUGGGCUUUAGCGGCAUUUUUAUGUAAGCGCUGCUAAUAUUCUGGGCUUUAGCGGUAAUUUUAUGUAAGCGCCGCUAAUGUUUUGGGCUUUAGCGGCGUUUUUAUGUAAGCGCCGCUAAUGUUCUGGGCUUUAGCGG