ncRNA ID | novel_gra_miR448 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr10:33739683-33739828 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCUAAUGUUCUGGGCUUUAGCGGC - 24 |
Stem-loop(if miRNA) |
--     U    U    U        A   U    U            UA   UG   U        AA  UU   GCUAA GUUC GGGC UUAGCGGC UUU UAUG AAGCGCUGCUAA  UUC  GGC UUAGCGGU  UU  A   ||||| |||| |||| |||||||| ||| |||| ||||||||||||  |||  ||| ||||||||  ||   CGAUU CGGG CUUG AAUCGCCG GAA GUAU UUUGCGGCGAUU  GGG  UUG AAUCGCCG  AA  U GG     U    U    U        C   U    U            UC   UU   U        CG  UG |
Stem-loop sequence | GCUAAUGUUCUGGGCUUUAGCGGCAUUUUUAUGUAAGCGCUGCUAAUAUUCUGGGCUUUAGCGGUAAUUUUAUGUAAGCGCCGCUAAUGUUUUGGGCUUUAGCGGCGUUUUUAUGUAAGCGCCGCUAAUGUUCUGGGCUUUAGCGG |