| ncRNA ID | novel_gra_miR442 |
| Species | Gossypium raimondii |
| Class | miRNA |
| Genome position | Chr9:33996420-33996501 [-] |
| Reference genome | Graimondii2_0 |
| Source | SRR616255;SRR616257 |
| Length | 21 |
| Mature sequence(if miRNA) | 62 - CCAAAGGCAGUGACCCUGUUA - 82 |
| Stem-loop(if miRNA) |
-- CU -- AUA U CCC CCAAAGGCAGUGACC GUUA GUAA UGU ACA U ||||||||||||||| |||| |||| ||| ||| A GGUUUCCGUCACUGG UAAU UAUU ACA UGU A GU AG AA -GG C AUU |
| Stem-loop sequence | CCAAAGGCAGUGACCCUGUUAGUAAAUAUGUUACACCCUAAUUAUGUCACAGGUUAUAAUAAUGAGGUCACUGCCUUUGGUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_012583678.1 |
|
1.0 | PREDICTED: Gossypium raimondii structural maintenance of chromosomes protein 6A-like (LOC105764888), transcript variant X2, mRNA | structural maintenance of chromosomes protein 6A-like(LOC105764888) | coding protein | psRNATarget | |||||||||
| XM_012583677.1 |
|
1.0 | PREDICTED: Gossypium raimondii structural maintenance of chromosomes protein 6A-like (LOC105764888), transcript variant X1, mRNA | structural maintenance of chromosomes protein 6A-like(LOC105764888) | coding protein | psRNATarget |