ncRNA ID | novel_gra_miR441 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:32968021-32968236 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCUAAAGAUCGAGCAUUAGCGGUG - 24 |
Stem-loop(if miRNA) |
--          -   C        UG  CCUAG               --AA                     GG      C    AAAAAACCUAAGCAU   GACAUCGUU   GCUAAAGAUC GAG AUUAGCGG  CU     GAAAGCGCCACUAAA    UGAGCAUUAGCGGUGUUUUUU  AAAAAC CCGC               AAC         U   |||||||||| ||| ||||||||  ||     |||||||||||||||    |||||||||||||||||||||  |||||| ||||               |||   CGAUUUCUAG CUC UAAUCGCC  GA     UUUUUGCGGUGAUUU    ACUCGUAAUCGCCGCGAAAAA  UUUUUG GGCG               AGA         U GG          A   A        GU  AAAAA               CUAG                     AA      C    ---------AUUUCU   CUUUCCAUC |
Stem-loop sequence | GCUAAAGAUCGAGCAUUAGCGGUGCUCCUAGGAAAGCGCCACUAAAAAUGAGCAUUAGCGGUGUUUUUUGGAAAAACCCCGCAAAAAACCUAAGCAUAACGACAUCGUUUUCUACCUUUCAGAUCUUUAGCGGCGUUUUUAAAAAAAGCGCCGCUAAUGCUCAGAUCUUUAGUGGCGUUUUUAAAAAAGUGCCGCUAAUACUCAGAUCUUUAGCGG |