ncRNA ID | novel_gra_miR438 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:19654242-19654353 [+] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 89 - ACGACUUUUGUAGUAUGUAGCAUC - 112 |
Stem-loop(if miRNA) |
--G A       -    U  C          U      AUAA    --C  A    GAAU    G CUAUGUA UGCG GA UCGUACACUU GAUGUA    AAGC   UG GUUC    A    | ||||||| |||| || |||||||||| ||||||    ||||   || ||||    G    C GAUGUAU AUGU UU AGCAUGUGGA UUACGU    UUCG   GC CAAG    A CUA -       G    U  C          -      ---A    AAA  -    GAAU |
Stem-loop sequence | GGACUAUGUAUGCGUGACUCGUACACUUUGAUGUAAUAAAAGCCUGAGUUCGAAUAGAUAAGGAACCGAAAGCUUAUGCAUUAGGUGUACGACUUUUGUAGUAUGUAGCAUC |