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BaseInfo

ncRNA ID novel_gra_miR433
Species Gossypium raimondii
Class miRNA
Genome position Chr7:8202743-8202955 [-]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - AUACUGAUACUUGCUAUUGACACG - 24
Stem-loop(if miRNA) --      A  A                       --UAAUUUUU  C      AGG            A   C           --                  UUU
  UGUCAA AG AGGUAUCAGUAUACGAAAAAAGU          UU GUGGUG   UGCUAAUAGCCG CAC ACCUUUUUUGU  GAAUUUUUUUUUUACUUU   C
  |||||| || |||||||||||||||||||||||          || ||||||   |||||||||||| ||| |||||||||||  ||||||||||||||||||   A
  ACAGUU UC UUCAUAGUCAUAUGCUUUUUUCA          AA CACCAC   ACGGUUAUCGGC GUG UGGAAAAAACA  CUUAAAAAAAAAAUGAAA   U
GC      A  G                       UUUUUUUUUU  A      CGG            C   U           UC                  CUG
Stem-loop sequence UGUCAAAAGAAGGUAUCAGUAUACGAAAAAAGUUAAUUUUUUUCGUGGUGAGGUGCUAAUAGCCGACACCACCUUUUUUGUGAAUUUUUUUUUUACUUUUUUCAUGUCAAAGUAAAAAAAAAAUUCCUACAAAAAAGGUUGUGCCGGCUAUUGGCAGGCCACCACAAAUUUUUUUUUUACUUUUUUCGUAUACUGAUACUUGCUAUUGACACG