Search result

BaseInfo

ncRNA ID	novel_gra_miR432
Species	Gossypium raimondii
Class	miRNA
Genome position	Chr7:11947303-11947382 [-]
Reference genome	Graimondii2_0
Source	SRR616257
Length	21
Mature sequence(if miRNA)	60 - GAAUGCUGACUGGUUCGAGAC - 80
Stem-loop(if miRNA)	--     CU A           C      -UU     GGA   GAAUG  G CUGGUUCGAGA CAUUCA   CAUAU   C   |||||  | ||||||||||| ||||||   |||||   C   CUUAC  C GACCAGGCUUU GUAAGU   GUGUA   U CC     UU G           A      UUU     AAU
Stem-loop sequence	GAAUGCUGACUGGUUCGAGACCAUUCAUUCAUAUGGACCUUAAAUGUGUUUUGAAUGAUUUCGGACCAGGCUUCAUUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_012633817.1	ncRNA:21   CAGAGCUUGGUCAGUCGUAAG   1   *||||*||||||*|||||||| targets:99   AUCUCCAACCAGGCAGCAUUC   119 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii 7-deoxyloganetin glucosyltransferase-like (LOC105802271), transcript variant X3, mRNA	7-deoxyloganetin glucosyltransferase-like(LOC105802271)	coding protein	psRNATarget
XM_012633816.1	ncRNA:21   CAGAGCUUGGUCAGUCGUAAG   1   *||||*||||||*|||||||| targets:373   AUCUCCAACCAGGCAGCAUUC   393 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii 7-deoxyloganetin glucosyltransferase-like (LOC105802271), transcript variant X2, mRNA	7-deoxyloganetin glucosyltransferase-like(LOC105802271)	coding protein	psRNATarget
XM_012633815.1	ncRNA:21   CAGAGCUUGGUCAGUCGUAAG   1   *||||*||||||*|||||||| targets:488   AUCUCCAACCAGGCAGCAUUC   508 Target Full Sequence	2.5	PREDICTED: Gossypium raimondii 7-deoxyloganetin glucosyltransferase-like (LOC105802271), transcript variant X1, mRNA	7-deoxyloganetin glucosyltransferase-like(LOC105802271)	coding protein	psRNATarget