ncRNA ID | novel_gra_miR426 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr7:32285701-32285844 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616257 |
Length | 24 |
Mature sequence(if miRNA) | 121 - GUGAUCUCGAAUCACUGUUUCUGA - 144 |
Stem-loop(if miRNA) |
--   A       -        U     ACCA  G     UA          AAAUCCGAAUA  U    ---UA  AA   GUG UCUCGAA UCACUGUU CUGAC    CU AAAAU  GGCUGUUACA           UG UGCC     UC  C   ||| ||||||| |||||||| |||||    || |||||  ||||||||||           || ||||     ||   CAC AGGGCUU GGUGACAA GGCUG    GG UUUUA  CCGACAAUGU           AC ACGG     AG  U AA   C       U        -     AUCC  G     GC          ---------AA  U    UACUG  CA |
Stem-loop sequence | GUGAUCUCGAAUCACUGUUUCUGACACCACUGAAAAUUAGGCUGUUACAAAAUCCGAAUAUGUUGCCUAUCAACUACGAGUCAUGGCAUCAAAUGUAACAGCCCGAUUUUGGGCCUAGUCGGAACAGUGGUUUCGGGACCACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012623602.1 |
|
0.0 | PREDICTED: Gossypium raimondii uncharacterized LOC105794432 (LOC105794432), transcript variant X2, mRNA | uncharacterized LOC105794432(LOC105794432) | coding protein | psRNATarget |