ncRNA ID | novel_gra_miR422 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:51019304-51019376 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255;SRR616257 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGGAGGUGAUGAUUUUUGAAG - 21 |
Stem-loop(if miRNA) |
--            C         UUAAUUCUU   A   G   UCAGAAAUCAUC CUUCCUUGC         GGU UGA U   |||||||||||| |||||||||         ||| |||   AGUUUUUAGUAG GGAGGAACG         UUA ACU A GA            U         ---------   C   A |
Stem-loop sequence | UCAGAAAUCAUCCCUUCCUUGCUUAAUUCUUGGUAUGAGUAAUCACAUUGCAAGGAGGUGAUGAUUUUUGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012604901.1 |
|
2.5 | PREDICTED: Gossypium raimondii proline-rich receptor-like protein kinase PERK13 (LOC105780517), mRNA | proline-rich receptor-like protein kinase PERK13(LOC105780517) | coding protein | psRNATarget |