Search result

BaseInfo

ncRNA ID novel_gra_miR414
Species Gossypium raimondii
Class miRNA
Genome position Chr9:53736120-53736339 [-]
Reference genome Graimondii2_0
Source SRR616255
Length 24
Mature sequence(if miRNA) 197 - AAUGCUCUGGGCUUUAGCGGCGUU - 220
Stem-loop(if miRNA) --AAU         U              GAA      G      U      -UUU              G      C G      U     -AUUU             U
     GCUCUGGGC UUAGCGGCGUUUUU   GAAGCG CGCUAA GCUCUA    UUAGCGGCGUUUUU GAAAAG G CGCUAA GCUCU     UUAGCGGCGUUUU G
     ||||||||| ||||||||||||||   |||||| |||||| ||||||    |||||||||||||| |||||| | |||||| |||||     |||||||||||||
     CGGGGCUCG AAUCGCCGCGAAGA   UUUUGC GCGAUU CGGGGU    AAUCGCCGCGAAGA UUUUUU C GCGAUU CGGGG     AAUCGCCGCGAAA G
GAUUU         U              ACC      G      U      UCGU              A      A G      U     CUCGU             A
Stem-loop sequence AAUGCUCUGGGCUUUAGCGGCGUUUUUGAAGAAGCGGCGCUAAUGCUCUAUUUUUAGCGGCGUUUUUGGAAAAGCGGCGCUAAUGCUCUAUUUUUAGCGGCGUUUUUGGAAAAGCGCCGCUAAUGCUCGGGGCUUUAGCGGCAUUUUUUAAGAAGCGCCGCUAAUGCUUGGGGCUUUAGCGGCGUUUUCCAAGAAGCGCCGCUAAUGCUCGGGGCUUUAG