ncRNA ID | novel_gra_miR414 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:53736120-53736339 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 24 |
Mature sequence(if miRNA) | 197 - AAUGCUCUGGGCUUUAGCGGCGUU - 220 |
Stem-loop(if miRNA) |
--AAU         U              GAA      G      U      -UUU              G      C G      U     -AUUU             U      GCUCUGGGC UUAGCGGCGUUUUU   GAAGCG CGCUAA GCUCUA    UUAGCGGCGUUUUU GAAAAG G CGCUAA GCUCU     UUAGCGGCGUUUU G      ||||||||| ||||||||||||||   |||||| |||||| ||||||    |||||||||||||| |||||| | |||||| |||||     |||||||||||||      CGGGGCUCG AAUCGCCGCGAAGA   UUUUGC GCGAUU CGGGGU    AAUCGCCGCGAAGA UUUUUU C GCGAUU CGGGG     AAUCGCCGCGAAA G GAUUU         U              ACC      G      U      UCGU              A      A G      U     CUCGU             A |
Stem-loop sequence | AAUGCUCUGGGCUUUAGCGGCGUUUUUGAAGAAGCGGCGCUAAUGCUCUAUUUUUAGCGGCGUUUUUGGAAAAGCGGCGCUAAUGCUCUAUUUUUAGCGGCGUUUUUGGAAAAGCGCCGCUAAUGCUCGGGGCUUUAGCGGCAUUUUUUAAGAAGCGCCGCUAAUGCUUGGGGCUUUAGCGGCGUUUUCCAAGAAGCGCCGCUAAUGCUCGGGGCUUUAG |