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BaseInfo

ncRNA ID novel_gra_miR411
Species Gossypium raimondii
Class miRNA
Genome position Chr10:57186040-57186182 [+]
Reference genome Graimondii2_0
Source SRR616257
Length 24
Mature sequence(if miRNA) 1 - AUGAAACUGUGAUUUCACGUCAUU - 24
Stem-loop(if miRNA) --                     A  U     G         --     ---A     U  A   GUCG   UC
  AUGAAACUGUGAUUUCACGUC UU UUAUC CUUUCCAAU  GAGAA    AAAUU UG UUU    CUU  C
  ||||||||||||||||||||| || ||||| |||||||||  |||||    ||||| || |||    |||
  UAUUUUGACACUAAGGUGUAG AG AGUAG GAAAGGUUA  CUCUU    UUUAA AC AAA    GAG  A
CA                     C  U     G         CC     ACUG     U  A   AAAA   UA
Stem-loop sequence AUGAAACUGUGAUUUCACGUCAUUUUUAUCGCUUUCCAAUGAGAAAAAAUUUUGAUUUGUCGCUUUCCAAUGAGAAAAAAAACAUAAUUUGUCAUUCUCCCAUUGGAAAGGGAUGAUGACGAUGUGGAAUCACAGUUUUAUAC