ncRNA ID | novel_gra_miR407 |
Species | Gossypium raimondii |
Class | miRNA |
Genome position | Chr9:58771843-58771908 [-] |
Reference genome | Graimondii2_0 |
Source | SRR616255 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CUAUAGGUUAGGACCUUUAGCGG - 23 |
Stem-loop(if miRNA) |
--    U     AG     U        C   U   GCUA AGGUC  GACCU UAGCGGCG UUU A   |||| |||||  ||||| |||||||| ||| C   CGAU UCCAG  UUGGA AUCGCCGC AAA A GG    U     GA     U        -   C |
Stem-loop sequence | GCUAUAGGUCAGGACCUUUAGCGGCGCUUUUACACAAACGCCGCUAUAGGUUAGGACCUUUAGCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_012601792.1 |
|
2.5 | PREDICTED: Gossypium raimondii ubiquitin domain-containing protein 1 (LOC105778162), mRNA | ubiquitin domain-containing protein 1(LOC105778162) | coding protein | psRNATarget |